| EST name | EST sequence |
| gi|40393857|gb|BP144386.1|BP144386 | CTAACCAGGATTCTCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGG ACATGTGGCGTACGGAAGACCCACTCCCCGGCGCCGCTCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCAGCCCGTGG ACGGTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAGTCGGGTTGCTTGGGAATGCAGCCCAA AGCGGGTGGTAAACTCCATCTCTTTTTCCTTTTTTCTAGCGGCCGGGAAGATGGCGGATATTCAGACCGAGCGTGCCTAC CAAAAGCAGCCGACCATCTTTCAAAATAAGAAGAGGGTCCTGCTTGGCGAAACTGGCAAGGAGAAGCTCCCGCGATACTA CAAGAACATCGGCCTGGGCTTCAAGACACCGAAGGAAGCCATCGAGGGCACCTACATTGACAAGAAATGCCCTTTTACTG GTAACGTCTCCATCCGAGGGCGGATCCTGTCTGGCGTGGTGACCAAGATGAAGATGCAGCGGACCATCGTCATCCGCCGA GACTACCTCCACTACATCCGAAAGTACAACCGCTTTGAGAAGCGCCACAAGAATATGTCCGTGCACCTCTCCCCCTGCTT CAGGGACGTCCAGATCGGCGACATTGTCACAGTGGGCGAGTGTCGGCCCCTGAGCAAGACGGTGCGCTTCAATGTGCTCA AGGTCACCAAGGCTGCTGGCACCAAGAAAGCAGTTCCAGAAGTTCTGAGACTGCACCCCATCCACTGCCC |
Most similar to sp|P62282|RS11_RAT
>BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9S7N7|PSAG_ARATH Photosystem I reaction center subunit V,
chloroplastic OS=Arabidopsis thaliana GN=PSAG PE=1 SV=1
Length = 160
Score = 93.2 bits (230), Expect(2) = 8e-28
Identities = 48/55 (87%), Positives = 49/55 (89%)
Frame = +1
Query: 118 LLSPTIFSTGISNKNPNSISFHGLGPLRLGGSSYALPKLSTNGRKSSSGVVRAEL 282
LLSPT FST IS+KNPNSISFHGL PLRLGGSS ALPKLST GRKSSS VVRAEL
Sbjct: 8 LLSPTTFSTAISHKNPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVRAEL 62
Score = 50.1 bits (118), Expect(2) = 8e-28
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +2
Query: 320 LFLGRFVFLNLQREKVAKQGLPEQKGK 400
LFLGRFVF N QRE VAKQGLPEQ GK
Sbjct: 76 LFLGRFVFFNFQRENVAKQGLPEQNGK 102
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
GN=Rps11 PE=1 SV=3
Length = 158
Score = 293 bits (749), Expect = 1e-78
Identities = 143/143 (100%), Positives = 143/143 (100%)
Frame = +3
Query: 291 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 470
MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 471 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 650
PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 651 QIGDIVTVGECRPLSKTVRFNVL 719
QIGDIVTVGECRPLSKTVRFNVL
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVL 143